Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------METGK-------SDVLDKIEKINKKDSALQEIIPKGYEIEHHQC-----------------GVALYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNE-VSFNMLFYDNKTPVNIAVSAEEI--------------SDSRQLLKLVNKK-----------LDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVKGYF--------IYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSK--GTLQGYSKKV---FAQIKDLPMVMVM-----LYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSF-------PMFKDDTRNTHPKFV--------------TSTTYNFSSGESKSRSNINLTLNAKKEWRNILISTGES----SIANMADEKAGVSARVVTLQDP-----------------PYPDNFDFTTLDKSFRENYGTLGLA----------FIKQYES--KKDVYKNAFESYQRYFNQKGSN-EIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDSV------------NYGD----VKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLI------KDKKRIQKQVKHKSQRHLGYAIKKEIIEEL--------GFDFS----------------------ISHNPYTESY--------------- |
| 4BQ2 Chain:A ((2-747)) | SHMLFDFENDQVPSNIHFLNARASIETYTGINGEPSKGLKLAMQSKQHSYTGLAIVPEQPWDWSEFTSASLYFDIVSVGDHSTQFYLDVTDQNGAVFTRSIDIPVGKMQSYYAKLSGHDLEVPDSGDVNDLNLASGLRSNPPTWTSDDRQFVWMWGVKNLDLSGIAKISLSVQSAMHDKTVIIDNIRIQPNPPQDENFLVGLVDEFGQNAKVDYKGKIHSLEELHAARDVELAELDGKPMP----SRSKFGGWLAGPKLKATGYFRTEKINGKWMLVDPEGYPYFATGLDIIRLS---------NSSTMTGYDYDQATVAQR--SADDVTPEDSKGLMAVSEKSFATRHLASPTRAAMFNWLPDYDHPLANHYNYRRSAHSGPLKRGEAYSFYSANLERKYGETYPGSYLDKWREVTVDRMLNWGFTSLGNWTDPAYYDNNRIPFFANGWVIGDFKTVSSGADFWGAMPDVFD-PEFKVRAMETARVVSEEIKNSPWCVGVFIDNEKSFGRPDSDKAQYGIPIHTLGRPSEGVPTRQAFSKLLKAKYKTIAALNNAWGLKLSSWAEFDLGVD--VKALPVTDTLRADYSMLLSAYADQYFKVVHGAVEHYMPNHLYLGARFPDWGMPMEVVKAAAKYADVVSYN-SYKEGLPKQKWAFLAELDKPSIIGEFHIGAMDHGSYHPGLIHAASQADRGEMYKDYMQSVIDNPYFVGAHWFQYMDSPLTGRAYDGENYNVGFVDVTDTPYQEMVDAAKEVNAKIYTERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 68210 for 3884 contacts (17.6/contact) +
2D Compatibility (PS) -57385 + (NN) 1435 + (LL) 1496
1D Compatibility (HY) -8000 + (ID) 5550
Total energy: 206.0 ( 0.05 by residue)
QMean score : 0.093
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