Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK |
4AO6 Chain:A ((5-247)) | MSWNG--KDERKLSVQERGFSLEVDGRTVPGVYWSPAEGS-----SDRLVLLGHEYIEQVAKLLVGRGISAMAIDGPGTDVVG--LDAFPRMWHE---------------GGGTAAVIADWAAALDFIEAEE-----------GPRPTGWWGLSMGTMMGLPVTAS-----DKRIKVALLGLMGV-EGVNGEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTKQKTLHVNPGKHSAVPTWEMFAGTVD-YLDQRLK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117240 for 1929 contacts (-60.8/contact) +
2D Compatibility (PS) -24238 + (NN) -10147 + (LL) 3948
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -153777.0 ( -79.72 by residue)
QMean score : 0.317
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