Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKIENEIVNKT-----YLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIPK---RKKDEYRELMIPNM-------ALKNIQRWILDNVLYRRQ-VHKCA-TGFVPRKSIVNNA-IPHVGQKYILKMDIENFFPSITFKQVRKIFSEMGY----KFELATALANL-CTVNNQLPQGAPTSPYIANIIFYNIDKRIFSYC-----------QKNNLRY------TRYADDITISGSNKVSFSKEIIREIVNQYNFRINESK-----TIMFKPGDRKKVT--GIIVNEKISVPKTLIREVR--KQIYFVNKFGLEEHLIRNNYSLDYEQQFI-MSIYGKISFIKMIDFKKGVSL--QKKFNEV--LGNIES-SNMYRDNIDFDD-IELHWIN |
| 4FS7 Chain:A ((2-394)) | YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVN---IPPVVTYKDNKYDVVSIGYAAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCD----FKEITIPEGVTVIGDEAFATCESLEYVS-LPDSMETLHNGLFSGCGK---LKSIKLPRNLKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FS7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113692 for 2345 contacts (-48.5/contact) +
2D Compatibility (PS) -32970 + (NN) 7585 + (LL) 416
1D Compatibility (HY) -22000 + (ID) 3350
Total energy: -164011.0 ( -69.94 by residue)
QMean score : 0.148
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