Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQI---N-------------NKKFQVAVNEEFVQ----KSDFIQPNDTVALIPPVSGG
2L52 Chain:A ((6-99))
VKVKLFANLREAAGTPE--LPLS-GEKVIDVLLSLTDKYPALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKDSDEIGILPPVSGG
General information:
TITO was launched using:
RESULT:
Template:
2L52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47268 for 491 contacts (-96.3/contact) +
2D Compatibility (PS) -8079 + (NN) -2471 + (LL) 148
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -64120.0 ( -130.59 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_2L52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L52-query.scw
PDB file :
Tito_Scwrl_2L52.pdb
: