Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSIKTITPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMDYHPIFKTLLGVVVAIQFTVPALIGALVAMKFDLSPLAIAVVASAAYVGSGAAQFKNGAWMITGIGDLINTMITAAIAVLFILLIQHRVGSMALIVFPTVVGGISGAIGV--LILPYTKMITTAIGNMVNGFTELQPIVMSILISMVFSLIIISPLSTVAIAFAIGITGLAAGSASIGISATEAVLIIGTSKVNRLGVPLSVFFGGVKMMIPNMVK-YPILMLPILTTAIVSGLVSALVGIHGTKESAGFGFIGMVGPINAFKFMEVDSAWLSVLLIVVAFFVVPFVTAWLADIIYRKVFRLYTNDIFKFMG |
3WZM Chain:A ((15-278)) | MRTRSTISTPNGITWYYEQEGTGPDVVLVPDG-LGE--------CQMFDSSVSQIAAQGFRVTTF---------DMPGMSRSAKAPPET----------------------YTEVTAQKLASYVISVLDALD----IKHATVWGCASGASTVVALLLGYPDRIRNAMCHELP--TKL-----------------LDHLSNTAVLEDEEISKILANVMLNDVSG-------GSEAWQAMG----------DEVHARLHKNYPVWARGYPRTIPPSAPVKDLEALRGKPLDWTVG---AATPTESFFDNIVTATKAGVNIGLLPGMHFPYVS-------HPDVFAKYVVETTQKHL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268477 for 2324 contacts (-115.5/contact) +
2D Compatibility (PS) -26565 + (NN) 4275 + (LL) 8600
1D Compatibility (HY) -3600 + (ID) 3050
Total energy: -288817.0 ( -124.28 by residue)
QMean score : 0.210
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