Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKT-------ITYYTVPHAP-AQDIVVK--GYE-DVTNTFDVIIIAVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEHIPFK-N---VCQAVVYISGQKKGDVVTHFR-DYQLRIQDNAL-----TRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIM-HNPEIRILCRQLLLDGCRVAQAEGLNFSEQTV-DTIMTIYQG-YPDEMGTSMYYDIV-HQQPLEVEAIQGFIYRRAREHNLDTPYLDTIYSFLRAYQQNM |
2EW2 Chain:A ((4-312)) | -MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTEIDYINGAVWRKGQKYNVATPFCAMLTQLVHGKEEL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230101 for 2326 contacts (-98.9/contact) +
2D Compatibility (PS) -31001 + (NN) -6424 + (LL) 416
1D Compatibility (HY) -16400 + (ID) 2800
Total energy: -286310.0 ( -123.09 by residue)
QMean score : 0.470
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