Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKI-TERHARAVLSLS---DSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR |
| 1R71 Chain:A ((23-135)) | -------------------------------------------------------------------------------------------------------------E--ADQVIENLQRNELTPREIADFIGRELA-KGKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLDDDT-QEITRGTVKLLREFLD--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15334 for 716 contacts (-21.4/contact) +
2D Compatibility (PS) -11993 + (NN) -9079 + (LL) 12900
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -28806.0 ( -40.23 by residue)
QMean score : 0.716
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