Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYENCYLGRCCINNHKIILPSDPDLRVQAEPEIALECDVKYDEKHLVTKLVP-------NFFMAFNDASVRNLEATKLSQKKNFSPA-----SKGIGQKLPIDRFVYGGVCNNFSIASFLKYDNVWHIYGENSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE |
3V77 Chain:A ((19-208)) | ------VCVGRNYAAHAKELNNP------------IP--SSPILFIKPASSAV--P-FGPVFSIPK-DQGSVHHELEIAILIGKA------LSRASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEFVAVNL-ASEDEWQAIGLTLE--KNGQFQQQGSSAEML-------FPILPLIAHMSE---------------HFSLQPGDVILTGTP-----AGVGPLEVGDSLSAKLSLEDNVLLTCDGVVI--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51768 for 1332 contacts (-38.9/contact) +
2D Compatibility (PS) -19274 + (NN) -1073 + (LL) 5888
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -67327.0 ( -50.55 by residue)
QMean score : 0.238
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