Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIERLVGNLRDLNPLDFNVDHVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSEPNFKVSLASDFKVVVK
3TJ9 Chain:C ((1-154))
MIIERLVGNLRDLNPLDFSVDYVDLEWFETRKKIARFKTRQGKDIAIRLKDAPKLGLSQGDILFKEEKEIIAVNILDSEVIHIQAKSVAEVAKICYEIGNRHAALYYGESQFEFKTPFEKPTLALLEKLGVQNRVLSSKLDSKERLTVSMPHSE----------------
General information:
TITO was launched using:
RESULT:
Template:
3TJ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62206 for 1063 contacts (-58.5/contact) +
2D Compatibility (PS) -16129 + (NN) -4303 + (LL) 1192
1D Compatibility (HY) -22000 + (ID) 7600
Total energy: -111046.0 ( -104.46 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3TJ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJ9-query.scw
PDB file :
Tito_Scwrl_3TJ9.pdb
: