Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MSILAEKLSSILKRYDELT---ALLSSVEVVSDIKKLTELSKEQSSIEEISVASKEYLSVLEGIKENKELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTT----DSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQFE-- |
| 4B46 Chain:A ((1-367)) | MKLAMIGFGQAGGKVVDKFVEYDRERNAGIVRAAVAVNSAKADLLGLKN---------IPKDQRVLIGQSRVKGHGVGADNELGAEIAEE------DIDEVQGAIDS--IPVHEVDAFLVVSGLGGGTGSGGAPVLAKHLKRIY----TEPVYGLGILPGSDE---GGIYTLNAARSFQTFVREVDNLLVFDNDAWRKTGESVQGGYDEINEEIVNRFGVLFGSVVDSSEIINTLAGGGVSTVGYASEGVTAHTTNRITSLVRKAALGRLTLPCEIEGAERALLVLAG--PPEHLNRKGIERGRKWIEEQTG---SMEVRGGDYPIPGAE---------KVAGVILLSGVTNVPRIKELQQVAIEAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 94410 for 2838 contacts (33.3/contact) +
2D Compatibility (PS) -32872 + (NN) -4206 + (LL) 3416
1D Compatibility (HY) -5600 + (ID) 2600
Total energy: 52548.0 ( 18.52 by residue)
QMean score : 0.163
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