Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKTAKVNDIVRDWVVLDAKDKVFGRLITEIAVLLRGKHRPFYTPNVDCGDFVVVINANKVKFSGMKLEDKEYFTHSGYFGSTKSKTLQEMLEKTPEKLYHLAVRGMLP-KTKLGKAMIKKLKVYRDDKHPHTAQTSKKDAK------------------------
1JJ2 Chain:I ((4-145))--------AEFDADVIVDARDCIMGRVASQVAEQALD------------GETVAVVNAERAVITGREEQIVEKYEKRVDIGNDNGY----FYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDRLSNIKFVTLGEISETLGANKTW


General information:
TITO was launched using:
RESULT:

Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44626 for 818 contacts (-54.6/contact) +
2D Compatibility (PS) -12817 + (NN) -5039 + (LL) 1444
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -65938.0 ( -80.61 by residue)
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1JJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JJ2-query.scw
PDB file : Tito_Scwrl_1JJ2.pdb: