Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYFLVVFLFLFVGCMKKDFTLKDLSLPQEASSYLASSQNSSHNNQSIDPQALRENLKESYLKAWYSPWLDAKVKSNKKEVFWILKEMNKSTGYGEDLKPNAKAFNDELIKNMDIERYPSTKIKAVVVRNNDVRAVPTNKPYYLSPKGYPFDRFQNSLVFPGTPVLITPFNPDKTYPPLQSSFVYGWIKVSELAYMRDKEIELLTKLKNYDMPIKEKNPLYTDYGEFYPHAKIGELFPLIPQIQNASQIPPKKELKAYGFLKDAKGYAALQSVFLDE--KDFFVFPKAFTSEIMAYFINT-MLGQKYGWGGLLGNR-DCSAF-TRDSFANFGILLPRNSYAQSRYANNYVDLSSMKAKEKEDYII--KNATPFGTLIYLKGHIMLYLGERNH-QAIVAHSIWSVQTQKHFKTLSHKIGGVVITSLWLAEEHNGAFSKKKLLIDRVLGMSDLKDFVHKTSSPLNAN |
| 2EVR Chain:A ((25-246)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLGEYQCLADLNLFDSPECTRLATQSASGRHLWVTSNHQNLAVEVYLCEDDYPGWLSLSDFDSLQPATVPYQAATFSESEIKKLLAEVIAFTQKAMQQSNYYLWGGTVGPNYDCSGLMQ-AAFASVGIWLPRDAYQQEGFTQPI----TIAELVAGDLVFFGTSQKATHVGLYLADGYYIHSSGKDQGRDGIGIDILSEQGDAVSLSYYQQLRGAGRVFKSYEPQRR--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29906 for 1663 contacts (-18.0/contact) +
2D Compatibility (PS) -21823 + (NN) 4279 + (LL) 14764
1D Compatibility (HY) -2800 + (ID) 1800
Total energy: -37286.0 ( -22.42 by residue)
QMean score : 0.204
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