Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAM-DEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQ----MLSGSFSNKEFQIGAYSNTTVKASIGSTSSDK----IGHVRMETSSFSGEGMLASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATGGTPVQSGT-VRELTINGVEIGTVNDVHKN---DADGRLTNAINSVKDRTGVEASLDIQGRINLHSIDGRAISVHAASAS-----GQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVNFSHVGFH---SAQGVAEYTVNL-RAVRGIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAA-ESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ |
| 2DKA Chain:A ((1-544)) | --MSIEQTLSQYLPSHPKPQGVT-----FTYGTAGFRMKADKLDYVTFTVGIIASLRSKYLQ------GKTVGVMITASNPPEDNGVKVVDPLGSMLESSWEKYATDLANASPSPEKNSLVEVIKNLVSDLKIDLSIPANVVIARDSRESSPALSMATIDGFQSVPNTKYQDFGLFTTPELHYVTRTLNDPDFGKPTEDGYYSKLAKSFQEIYTIEK---IDITIDAANGVGAPKIQELLEKYLHKEISFTVVNGDYKQPNLLNFDCGADYVKTNQKLPKNVKPVNNKLYASFDGDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGVKHLHHEAENFDIGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLKLSPSDWDNEYTDLPNKLVKVFKTTNAERLVPKGMQDEIDKLVAQYPNGRSFVRASAVRVYAEADT--QNNVEELSKAVSELVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48147 for 4291 contacts (11.2/contact) +
2D Compatibility (PS) -51010 + (NN) -3580 + (LL) 1464
1D Compatibility (HY) -12800 + (ID) 2700
Total energy: -20479.0 ( -4.77 by residue)
QMean score : 0.165
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