Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSRNEVLL-NGDINFKEVRCV-GDNGEVYGIISSKEALKIAQNLGLDLVLISASA-KPPVCKVMDYNKFRYQNEKKIKE--AKKKQKQIEIKEIKLSTQIAQNDINYKVKHA------REFIESNKHVKFKVVLKGRESQNSKAG-LDVLFR-VQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED |
| 1JP3 Chain:A ((13-240)) | LPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQI------AYAELYFTDVLWPDFDEQDFEGALNAFANRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 83929 for 1426 contacts (58.9/contact) +
2D Compatibility (PS) -19978 + (NN) 1740 + (LL) 428
1D Compatibility (HY) 1200 + (ID) 1400
Total energy: 65919.0 ( 46.23 by residue)
QMean score : 0.145
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