Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVANIELDRKVLADMAMNDMQAFKSVLESVKEHL
2GHJ Chain:A ((18-115))
------------------LAKGYRGQRSRSYRRAKEAVMRALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEAL
General information:
TITO was launched using:
RESULT:
Template:
2GHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32743 for 558 contacts (-58.7/contact) +
2D Compatibility (PS) -10971 + (NN) -6165 + (LL) 1832
1D Compatibility (HY) -9600 + (ID) 2700
Total energy: -60347.0 ( -108.15 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2GHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GHJ-query.scw
PDB file :
Tito_Scwrl_2GHJ.pdb
: