Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------MIKSWTKKWFLILFLMASCFGH-LVATTGEKYFKMANQALKRG-------------------DYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNLRNHLACASLGSMYEDGDGV-QKDFPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLKDGASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSLKEGSGCHNVAVMYYTGKGAPKDLEKATSYYKKGCALGFSGSCKVLEVIGKESDNLQDDAQNDTQDSVQ----------- |
3E4B Chain:A ((6-434)) | DQRLANEALKRGDTVTAQQNYQQLAELGYSEAQVGLAAQARLGRLLAAKATEAEHHEAESLLKKAFANGEGNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNTTDICYVELATVYQKKQQ-PEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIAPGYPASWVSLAQLLYD-FPELGDVEQMMKYLDNGRAADQPRAELLLGKLYYEGKWVPADAKAAEAHFEK-AVGREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDTPEANDLATQLEAPLTPAQRAEGQRLVQQELAARGTLLQLHA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85031 for 2296 contacts (-37.0/contact) +
2D Compatibility (PS) -31015 + (NN) -8676 + (LL) -152
1D Compatibility (HY) 8000 + (ID) 2100
Total energy: -118974.0 ( -51.82 by residue)
QMean score : 0.203
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