Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFGIPKHKDATGS----HALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGILENAS--VSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFHTPIMSYSTKFASSYYGPFRDVANSPPSFG-DRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
| 3OBK Chain:E ((22-341)) | ---RPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVP--IPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLF--PKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203708 for 2658 contacts (-76.6/contact) +
2D Compatibility (PS) -34209 + (NN) -15729 + (LL) 460
1D Compatibility (HY) -21600 + (ID) 6750
Total energy: -281536.0 ( -105.92 by residue)
QMean score : 0.578
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