Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRFSIFFKVVALFMITLFSFGAFAYYFVSSQISHENYQNEMRHYQFVTTINEILNNYSDYRAIEDYLYKIGFRETTIENLEKVLAKRRHQLHHRNIWYAEVFKFSDMVFILLKKDEHFVLYKDLHSVSYRNYFLAITVGLLLILFLFLFVLQSLLPLRELRSQVKRFAQGDKSVSCKSKQKDEIGDLANEFDNCIQKINAMNESRVLFLRSIMHELRTPITKGKILSSMLKEELS----------CKRFSSIFDHLNMLIEQFARIEQLASKNYGSNKEKFLMSDLIDKIEKMLLIDEDKKSPIHV--S---SSNYIIEADFELFAIALKNMIDNAIKYSDDK----QVFLDFIG--N--NLVVSNKSKPLK-EDFEKYLQPYFKSSNPSQAHGFGLGMYIIKNALEAMGLNLSYHYSNG-RICFTIHDCVFNSFYDLEADNEELPPPRKFERGEGNEGNRKSQLWG |
| 2C2A Chain:A ((12-250)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASS-HNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84014 for 1597 contacts (-52.6/contact) +
2D Compatibility (PS) -22654 + (NN) -13236 + (LL) 18500
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -111404.0 ( -69.76 by residue)
QMean score : 0.441
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