Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEFYASLKSIAMHVPSERVKNAEFQQFLDTSDEWIEKRTGIKERRFANDEEKSSDLGVIAAKQAIERAHLTPQDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMYENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESVLDVQISANGNFSNYLYTPRTLKPTPFNAKEEALEPFLRMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLTVHKYGNTSAASIPMAMCEAYEEGRLKKGDLMLLDAFGGGLTWGSALVYFGGI |
4X9K Chain:A ((3-325)) | -QCYAEITGWGKCLPPATLSNHDLSTFLDTSDEWIQSRTGIEQRRISH--VNTSDLATVAAQHAIACAGVSVEEIDLIIVATCSPDSL-IPNIASRVQQNLGIPSAAAFDLNAAATGFLYGLETATRLMQASHYRHALVIGAERLSFYLDWTKRDTAVLFGDGAGAVVLSKTEQ-KVGLQDAQIGCDAQGRDILAVPKFGTAMDRFDADNGYWAF-DFVGKEIFKRAVRGMGAAAQQVLARSGLSTEEIDVVIPHQANIRIIQTLCDLAGIAQDKAFVNIHRYGNTSAATVPIALCEALEQGKIKPHDDLLVAAFGAGLTWGAGHIRWGER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222808 for 3023 contacts (-73.7/contact) +
2D Compatibility (PS) -34193 + (NN) -14396 + (LL) 732
1D Compatibility (HY) -26000 + (ID) 6300
Total energy: -302965.0 ( -100.22 by residue)
QMean score : 0.546
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