Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIIPARLKSSRFENKMLEDIFGLPMVVRCAKNA-NL--VDECVVACDDESIMKACQKFHIKAVLTSKHHNSGTERCLEAAQILGLKNDERVLNLQGDEPFLEKKVILALLEATQNA-PFM--ATCAKVIDEEQAKSPN-LVKVVLDSQNNALYFSRSLIPFLRDFDAKRQTPLLGHIGIYGFHNKEILEELCALKPCVLEDTEKLEQL-RALYYQKKILVKIVQSESMGIDTKEDLQNALKIFSPNLLKR
1H7E Chain:A ((4-243))
VIVIPARYGSSRLPGKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDDPRVEQAVQAFGGKAIMTRNDHESGTDRLVEVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAI-SAAEAAEPSTVKVV-VNTRQDALYFSRSPIPYPRNA---EKARYLKHVGIYAYRR-DVLQNYSQLPESMPEQAESLEQLRLMNA-GINIRTFEVAATGPGVDTPACLEKVRALMAQELAEN
General information:
TITO was launched using:
RESULT:
Template:
1H7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141141 for 1764 contacts (-80.0/contact) +
2D Compatibility (PS) -25188 + (NN) -10974 + (LL) 844
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -195909.0 ( -111.06 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_1H7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7E-query.scw
PDB file :
Tito_Scwrl_1H7E.pdb
: