Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------MSLKFFRKNIVLKVVPRLAFGVLWLLHKTCKNRYFLAQD------LKEKPFIVSCWH--GELGMIGFAYLRLQKP--SVYVIASQHFDGSIAAGLFESFGFKNIR--GSSKKGGVKVLIEGLK---------RLKEGCDVAITPDGPKGPRHSIADGVIALAQKSGVGISACRVVCKNAWRLNTWDQFEIPKPFSEVRYYMLESVIIPKE-----------WELSKAKEYLKTRMDSVGFEESQRGLGA--------------- |
| 3HGT Chain:A ((27-328)) | TSGDYWLPTTMSLYQKELTDQIVSLHYSDILRYFETSHYKEDVILESMKTMCLNGSLVATHPYLLIDHYMPKSLITRDVPAHLAENSGKFSVLRDLINLVQEYETETAIVCRPGRTMDLLEALLLGNKVHIKRYDGHSIDFSCTVHLFSSEGINFTKYPIKSKARFDMLICLDTTVDTSQ---KDIQYLLQY---KAPIVRLVAINSIDHCRLFFGKKFDKNSREYLENVTAAMVILRDRLGTLPPDLRPIYSQKLHYLVEWLENPTVPWPLPDIYPLKQYTSMDVERSLLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70951 for 1509 contacts (-47.0/contact) +
2D Compatibility (PS) -22318 + (NN) -12130 + (LL) 312
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -112437.0 ( -74.51 by residue)
QMean score : 0.312
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