Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFNYEELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGADCVSIGEIQRALKAGIK----PYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENE-ETIK---LYDYAQGILNSLQ---GLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVITPCG----GREISPCDVVGPVCESSDTFLKD-------ANLPELEPGDKLAIEKVGAYGSSMASQYNSRPKLLELALEDHKIRVIRKREALEDLWRLEIEGLEGV |
| 1KNW Chain:A ((16-420)) | --NLLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIP-VNAGSVDMLDQLGQVS----PGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQ-RHHLQLVGIHMHIGSGVD-YAHLEQVCGAMVRQ---VIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELLHH--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207943 for 3284 contacts (-63.3/contact) +
2D Compatibility (PS) -41033 + (NN) -13195 + (LL) 952
1D Compatibility (HY) -24400 + (ID) 6450
Total energy: -292069.0 ( -88.94 by residue)
QMean score : 0.492
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