Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIE-----TFPEPMKMIVDAGHEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFSMTIHPDVSARPQVLLMHEKIIEHINQHEGVRWVTFNEIADDFLKRNPRKK |
2IW0 Chain:A ((43-245)) | ----------------------------LVALTYDD-GPFTFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHI----------------------IDTNLDTKDYENNKP-----ETTH-------------------------LSAEKF----NNELSADV---GANSYIVLSHDVHEQ--TVVSLTQKLIDTLKS-KGYRAVTVGECLGDAPENWYKAH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60694 for 1639 contacts (-37.0/contact) +
2D Compatibility (PS) -20766 + (NN) -7162 + (LL) 4596
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -89226.0 ( -54.44 by residue)
QMean score : 0.506
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