Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2C57 Chain:L ((14-169))
MKILVIQGPNLNMLGHR-----GMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNN------------
General information:
TITO was launched using:
RESULT:
Template:
2C57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118235 for 1167 contacts (-101.3/contact) +
2D Compatibility (PS) -17085 + (NN) -6538 + (LL) -704
1D Compatibility (HY) -23600 + (ID) 7550
Total energy: -173712.0 ( -148.85 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2C57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C57-query.scw
PDB file :
Tito_Scwrl_2C57.pdb
: