Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGSNHMKNKTLVISGAT--RGIGKAILYRFAQSGVNIAFTYNK--NVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVD-FFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSSTGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
4D45 Chain:D ((29-277)) | -----NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQP---EAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSR---EGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSSG-VTGENIHVDSGFHAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119485 for 2060 contacts (-58.0/contact) +
2D Compatibility (PS) -26375 + (NN) -7484 + (LL) 404
1D Compatibility (HY) -12400 + (ID) 4150
Total energy: -169490.0 ( -82.28 by residue)
QMean score : 0.543
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