Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDN-----------------KEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHK-QCDEFYIKHR |
2GZA Chain:A ((24-343)) | -----------------------------FHL-EPLRPWLDDPQITEVCVNRPGEVFCERA-SAWEYYAV---PNLDYEHLISLGTATARFVDQDIS-DSRPVLSAILPMGERIQIVRPPACE-HGTISVTIRKPSFTRRTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYP--VTAATLLRSCLRMKPTRILLAELRGGEAYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234339 for 2282 contacts (-102.7/contact) +
2D Compatibility (PS) -31901 + (NN) -12530 + (LL) 2348
1D Compatibility (HY) -24000 + (ID) 5200
Total energy: -305622.0 ( -133.93 by residue)
QMean score : 0.541
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