Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMNAIRWPKKWIPGETDNFVSNEVIVKGLDFNKVVQHLRDASHWEKYY-KNSGNIHMYHQDNTILKDKTRFCFETF---G--FLVEAEVEEFELKDAILRLAWRGWNEAKG-D---EYLEVYHAWLVEKLDNDRVRILTQESQSGVPAKALAKSVPNAMLNGHQAWLDGLVAYSR
3UID Chain:A ((11-160))
-----------------DTLTLTITA-EFAAPVTRIWQIYADPRQLEKVWGPPSHPATVV---DHDLRPGGRVTYFMTGPDGEKYAGYWEITAVDE---PHSFSFLDGFADEDFNPNTDLPVSTNVYTFTEHD-GGTRATYVGTYASAEA--LQQVLDMGVIEGASSAINQIDALLT
General information:
TITO was launched using:
RESULT:
Template:
3UID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60286 for 990 contacts (-60.9/contact) +
2D Compatibility (PS) -14928 + (NN) -728 + (LL) 1736
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -76156.0 ( -76.93 by residue)
QMean score : 0.376
(partial model without unconserved sides chains):
PDB file :
Tito_3UID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UID-query.scw
PDB file :
Tito_Scwrl_3UID.pdb
: