Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMAWG-GLSSLEGASHFVIYLARKG-VTYDSDYVKKVMHEVKKRDYDTHSRFAQIIKNFQE-NDIKLNSERSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMASFGYRNQEI-TPKTRWKTEVIYEVIE
2HAY Chain:A ((8-224))
-IHHQIQQALHFRTAVRVYKE-EKISDEDLALILDAAWLSPSSIGLEGWRFVVLDNKPIKEEIKPFAWGAQY-QLETASHFILLIAEKHARYDSPAIKNSLLR-RGIKEGDGLNSRLKLYESFQKEDMDMADNPRALFDWTAKQTYIALGNMMMTAALLGIDTCPIEGFHYDKVNHILAKHNVIDLEKEGIASMLSLGYRLRDPKHAQVRKPKEEVMSVVK
General information:
TITO was launched using:
RESULT:
Template:
2HAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78631 for 1538 contacts (-51.1/contact) +
2D Compatibility (PS) -23179 + (NN) -8742 + (LL) 204
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -131298.0 ( -85.37 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2HAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HAY-query.scw
PDB file :
Tito_Scwrl_2HAY.pdb
: