Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNTPLKLSVQALERYFLGQLFEFDAPLDLI-GTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1WRJ Chain:A ((2-150))
--IVYGLYKSPFG----PITVAKNEKGFVMLDFCDCAER-SSLDNDYFTDFFYKLDLYFEGKKVDLTEPVDFKPFNEFRIRVFKEVMRIKWGEVRTYKQVADAVKT--SPRAVGTALSKNNVLLIIPCHRVIGEK-SLGGYSRGVELKRKLLELEGIDV----------
General information:
TITO was launched using:
RESULT:
Template:
1WRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93865 for 1135 contacts (-82.7/contact) +
2D Compatibility (PS) -15982 + (NN) -6614 + (LL) 1064
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -130047.0 ( -114.58 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_1WRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WRJ-query.scw
PDB file :
Tito_Scwrl_1WRJ.pdb
: