Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILE-VAFSISNDVHLVLHHQQERIKEAVSKRFK--GVIFHAQIVEKYSGTGGAIMQENKTPIPTQHE-RVLILNADMPLITKDALTPLLESH---NNAIGLLH--LADPKGYGRVI-LENHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEEECFL-GVNSQTERAKAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGN------CLI-ENARIKAYSVIEESQIINS-----------SVGPFAHARPKSVI-CDSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
4K6R Chain:A ((14-472)) | --AVLVLAAGPGTRMRSDTPKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLC-GLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPPGALAVSAGPQRNIENWVQR--KRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K6R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283172 for 3461 contacts (-81.8/contact) +
2D Compatibility (PS) -47296 + (NN) -17815 + (LL) 752
1D Compatibility (HY) -26800 + (ID) 7550
Total energy: -381881.0 ( -110.34 by residue)
QMean score : 0.526
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