Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRASFV----EVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDEALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHLKIDTGMHRLGLE-PTFKSIET---IKKIRALKGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAFLEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTILKNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRIQVAINNQLAPLIGKVCMDQCFVKLNDIE--AKEGDEVILFGDKSTKANDASEIATLLNTIPYETISTLSKRLERVYV |
| 1XFC Chain:A ((11-379)) | --------LAEAMVDLGAIEHNVRVLREHAG-HAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ--AMAEDAVRLRGLMSHM-----PDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATMARP----DLTFDLVRPGIAVYGLSPVP---ALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRLEVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTYR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258276 for 3021 contacts (-85.5/contact) +
2D Compatibility (PS) -37938 + (NN) -3580 + (LL) 1260
1D Compatibility (HY) -17200 + (ID) 5700
Total energy: -321434.0 ( -106.40 by residue)
QMean score : 0.557
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