Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGP-YEHHS-NEVSWREGLCEVVRIPLNEHGLLDLEILEQTLKK-TPNSLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDCE--YQTGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGL-DFIHKKENNLLRVLVYGLKDLPAINIYGNLTASRVGVVAFN-IG-GISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 2DR1 Chain:A ((8-379)) | --------------------EAFKEVYEMVKPKYKLFTAGPVACFPEVLEIMKVQM--FSHRS-------KEYRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNG-VSK----------------GGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFD-IPLY--V--KYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEP-GHESPTITAVLTPPGIKGDEVYEAMRK-RGFELAKGYGS--------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201691 for 3224 contacts (-62.6/contact) +
2D Compatibility (PS) -39733 + (NN) -18080 + (LL) 3320
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -262834.0 ( -81.52 by residue)
QMean score : 0.465
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