Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLFKEITSKCYVNGNEMKENSSNVLDQYFTKPSVALKCFQKACEVIKKYENPDDFIFLEPSAGDGVFYDLFPKD---------RRIGIDIEPKRD--------------GFIQCDFLNYKLPVHQKVICLGNPPFGHRGV-----------------MALEFINHAR----NCDFVCFILPMFFES-QGKGSIKYRVK-GLNLLYSERLEKNAFIDFKNKEVDVHCVFQIWSKKYQNKKSEFSWYKNRHKEPFSEYIKVFTVSLAKNRECGKEWIFNQKASFYISSTFYKSTQIVENFEEVKYQSGIAVVFTSADKVLNAKLKKLFQEIDWTKYASLATNSCYHLGKSHIFQALHDHLDSLKGN |
| 2F8L Chain:A ((103-308)) | ------------------------IQVNHQMTPDSIGFIVAYLLEKVIQ---KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLL-VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFK-----S-QARKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103891 for 1192 contacts (-87.2/contact) +
2D Compatibility (PS) -16958 + (NN) -6587 + (LL) 9528
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -125508.0 ( -105.29 by residue)
QMean score : 0.478
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