Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDKIIEILQISPIVPVVVVENIKDAVPLAQSLIEGGIPIIEVTLRSNCALEAIELIAKNVPKMRVGAGTILNLTQLEQAQNRGAEFLISPGLTIKLLEHAKKKDMPLIPGVSSSSEVMQALELGYNALKFFPAEYCGGVKLLNAFNGPFKGVKFCPTGGISADNMRSYLALENVVCVGGSWLTPKDLIQNKEWDKITEICKRALALR
4BK9 Chain:B ((10-211))
--RDIDSVMRLAPVMPVLVIEDIADAKPIAEALVAGGLNVLEVTLRTPCALEAIKIM-KEVPGAVVGAGTVLNAKMLDQAQEAGCEFFVSPGLTADLGKHAVAQKAALLPGVANAADVMLGLDLGLDRFKFFPAENIGGLPALKSMASVFRQVRFCPTGGITPASAPKYLENPSILCVGGSWVVPAG---KPDVAKITALAKEASAFK
General information:
TITO was launched using:
RESULT:
Template:
4BK9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -179979 for 1752 contacts (-102.7/contact) +
2D Compatibility (PS) -22769 + (NN) -17016 + (LL) 972
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -244592.0 ( -139.61 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_4BK9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BK9-query.scw
PDB file :
Tito_Scwrl_4BK9.pdb
: