Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLKKSLCALLI--SGFFIPPLMKAASFVYDLKFMSFNFNLASPPNNPYWNSLTKMQGRLMPQIGVQLDKRQAL---MFGAWFIQNLHTHYSYFPYSWGVTMYYQYIGKNLRFFLG-----IVPRSYQIGHYPLSAFKKLFWFIDPTFRGGAFQFKPAYDPNRWWNGWFEGVVDWYGGRNWNNQPKKKNYDFDQFLYFVSSEFQFLKGYLGLGGQLVIFHNANSHSMGDNYPYGGNSYLKPGDATPQWPNGYPYF-SQKDNPQGGEIGKYSNPTI----LDRVYYHAYLKADFKNLMPYMDNIFMTFGTQSSQTHYCVRYASECKNARFYNSFGGEFYAQAQYKGFGIFNRYYFSNKPQMHFYATYGQSLYTGLPWYRAPNFDMIGL---YYLYKNKWLSVRADAFFSFVGGGDGYHLYGKGGKWFVMYQQFLTLTIDTRELIDFVKSKIPK |
| 1KOR Chain:A ((1-395)) | -------MKIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQG--EEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYEG----YYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDI--KVIAPWREWSF----QGRKEMIAYAEAHGIPVP-----PYSMDANLLHISYEGGVLEDPWA--------EPPKGMFRMTQDP--EEAPDAPEYVEVEFFEGDPVAVNGERL-SPAALLQRLNEIGGRHGVGRVDIVENRFVGMKSRGVYE----TPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGF-WYAPEREALQAYFDH-VARSVTGVARLKLYKG-NVYVVGRKAPKSLYR----------GYDQKDAEGFIKIQALRLRVRALVER--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148785 for 2865 contacts (-51.9/contact) +
2D Compatibility (PS) -37142 + (NN) 3683 + (LL) 4336
1D Compatibility (HY) 3600 + (ID) 2300
Total energy: -176608.0 ( -61.64 by residue)
QMean score : 0.063
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