Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLDRQSLEKAKHLIQSGLIDTIEVGAIKGLQEIHRFLFEGLYEFAGKIRDKNIS--NFRFANCLYLDLILPRMESMPQNNFNQIIEKYVEMNIAHPFLEGNGRATRIWLDLLLKKELKKIALWDRIDKAAYLSAIKRSPVNDLEIKTLLKKHLSSNINDSLTFIKGITQSYYYEGL
3SN9 Chain:C ((11-167))
--IDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVD------------------
General information:
TITO was launched using:
RESULT:
Template:
3SN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77334 for 1130 contacts (-68.4/contact) +
2D Compatibility (PS) -16704 + (NN) -7660 + (LL) 1336
1D Compatibility (HY) -19200 + (ID) 4700
Total energy: -124262.0 ( -109.97 by residue)
QMean score : 0.680
(partial model without unconserved sides chains):
PDB file :
Tito_3SN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SN9-query.scw
PDB file :
Tito_Scwrl_3SN9.pdb
: