Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRYFKDFTQVLALNYGSKNELSRAFKSLLEN------PPNHINNIESLENEISHRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
2E9D Chain:B ((19-243))
-----RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSS----------SALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQID-----EEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRF-----
General information:
TITO was launched using:
RESULT:
Template:
2E9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100791 for 1565 contacts (-64.4/contact) +
2D Compatibility (PS) -22367 + (NN) -10613 + (LL) 1472
1D Compatibility (HY) -14000 + (ID) 4550
Total energy: -150849.0 ( -96.39 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2E9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E9D-query.scw
PDB file :
Tito_Scwrl_2E9D.pdb
: