Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEV---N---FNDFIVVDVRELDEYE-ELHLPNATLISVN-DQEKLADF-----LSQHKDQKVLLHCRAGRRALDAAKSMHELGYT-PYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
2HHG Chain:A ((21-132))
---IETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSFSCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIE-----------
General information:
TITO was launched using:
RESULT:
Template:
2HHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48384 for 732 contacts (-66.1/contact) +
2D Compatibility (PS) -10790 + (NN) -2804 + (LL) 572
1D Compatibility (HY) -800 + (ID) 950
Total energy: -63156.0 ( -86.28 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2HHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HHG-query.scw
PDB file :
Tito_Scwrl_2HHG.pdb
: