Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANL-GVPVPCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLSRG-FLGSGVFTSVQKAYREVYRKDFDFSL
4UQM Chain:A ((21-240))------ANLPEDWQEALLPEFSAPYFHELTD-FLRQERKEYTIYPPAPDVFNALRYTPLGEVKVLILGQDPYHGP---NQ-----AHGLSFSVRPGVRVPPSLRNIYKELTEDIPGFVAPKHGYLRSWAEQGVLLLNAVLTVRAAQANSHQGKGWEHFTDAVIKAVNAKEERVVFILWGSYARKKKKLITGKNHVVIESGHPSPLSEQYFFGTRPFSKTNEALEKAGRGPVEWQL


General information:
TITO was launched using:
RESULT:

Template: 4UQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131575 for 1814 contacts (-72.5/contact) +
2D Compatibility (PS) -23614 + (NN) -9571 + (LL) 1520
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -186090.0 ( -102.59 by residue)
QMean score : 0.553

(partial model without unconserved sides chains):
PDB file : Tito_4UQM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UQM-query.scw
PDB file : Tito_Scwrl_4UQM.pdb: