Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEPEEIKAKVAYVKIPQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRYANVMAKDLQVVQYKTKDYDDKNNILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTLQNLSFDYFSLSNRQFKTLSFSAIPTQDTTGIQSDLIPKNNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILPTQNSTILGLSRDEMPIKILGS--HDDYYKILTPHEQIGWVKKDEVK |
1K9A Chain:A ((27-65)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11693 for 204 contacts (-57.3/contact) +
2D Compatibility (PS) -4131 + (NN) -1878 + (LL) 28288
1D Compatibility (HY) -800 + (ID) 250
Total energy: 9536.0 ( 46.75 by residue)
QMean score : 0.519
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