Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQG-II--------INEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRA--I------------------RP-----------------MKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPV-KEPQGSLIVDIGGGTTEIGVISLGGLVI-----SKSIRVAGDKLDQSIVEYIRKKFNLLIG-------------ERTGEEIKIEIGCAIKLDPPLTMEVSGRDQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVK-LPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 3QFU Chain:A ((16-393)) | --------NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD--------ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMST----RIEID--SFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLE--KKDVD-DIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176365 for 2590 contacts (-68.1/contact) +
2D Compatibility (PS) -33451 + (NN) -8853 + (LL) 1724
1D Compatibility (HY) -6400 + (ID) 3850
Total energy: -227195.0 ( -87.72 by residue)
QMean score : 0.442
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