Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVN-RYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVP-TFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGG-AGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 1H72 Chain:C ((1-290)) | -----MKVRVKAPCTSANLGVGFD------VFGLCLKEPYDVIEVEAIDDKEIIIEVD-DK--------NIPTDPDKNVAGIVAKKMIDDF---N-IGKGVKITIKKGVKA----GSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPL----------------------EVLHIPIDFKLDILIAIPNISINTKEAREILPKAVG-----LKDLVNNVGK-ACGMVYALYNKDKSLFGRYMMSDKVIEPVRGK------LIPNYFKIKEEVKD-KVYGITISGSGP--SIIAFPKEEF-IDEVENILRDYYENTIRTEVG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125949 for 2620 contacts (-48.1/contact) +
2D Compatibility (PS) -31235 + (NN) -14665 + (LL) 5152
1D Compatibility (HY) -6400 + (ID) 2400
Total energy: -175497.0 ( -66.98 by residue)
QMean score : 0.353
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