Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKKGIILVLSVILIFSIGLLVNNLMTNNKDTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVL-AEKGMDYPFNNVREELK--SSDYTFVDLETAITTRTKKVPYQEF---WIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSG----HSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK |
| 3AV0 Chain:A ((18-251)) | -------------------------------------------------------GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLH--------SGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEE-SPLALLKD-YVKILD---------GKDVINVNGEEIFICGTYYHKK---SK---R------EEMLDKLKNFESE----AKNYKKKILMLHQGINPY-IPLDYE--L-EHFDLPK-FSYYALGHIHKRILER-FNDGILAYS-GSTEIIYRNEYEDYKKEG-KGFYLVDFSG-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70154 for 1803 contacts (-38.9/contact) +
2D Compatibility (PS) -23767 + (NN) -6251 + (LL) 8064
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -100008.0 ( -55.47 by residue)
QMean score : 0.385
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