Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTFFDKARELTEELEKTQAESIHQAAKLVADSIMNDGIIQAFGSGHSYAAAIEVCGRAGG------LIPSKVIMDP-A--GGYYESIEGVGSLLTHR--LQAKPNDIFFLISNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYE---FADVILDNRSVQGDAALELEGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYEYNFAIEDKFADRIFHL
1X92 Chain:A ((30-197))
----------------------YIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGG-----------GMASLLLPEDVEIRVPSKITA----------RIQEVHLLAIHCLCDLIDRQLFGS-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100938 for 1290 contacts (-78.2/contact) +
2D Compatibility (PS) -16389 + (NN) -1918 + (LL) 5344
1D Compatibility (HY) -2000 + (ID) 1200
Total energy: -117101.0 ( -90.78 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1X92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X92-query.scw
PDB file :
Tito_Scwrl_1X92.pdb
: