Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFGK----------HTTCHADIIAEHDGKQLSFNGGWHDAGD----VSQQLIQTAEVTMALYEMAASLP---EKEETLRMRLLEEGEWGLDFILKTRFGDG-------FRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIAD----NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQ--QYSVLNGEITGEIPVGMETFR-----------NEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS-------------
1TF4 Chain:B ((1-460))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPAFNYAEALQKSMFFYEAQRSGKLPE--NNRVSWRGDSGLNDGADV-------GLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIRSG-----QMPYLKDNLRWVNDYFIKAH-PS-PNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGV---YSDCVPAGAFYNSWSG-YQDELVWGAYWLYKATGDDSYLAKAEYEYDFLSTEQQ-------------------TDLRSYRWTIAWDDKSYGTYVLLAKET--G-----KQKYIDDANRWLDYWTVGVN-GQRVPYSPGGM-----------------------------------------AV--LDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGGTPLADFPPTEEPDG


General information:
TITO was launched using:
RESULT:

Template: 1TF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109409 for 3578 contacts (-30.6/contact) +
2D Compatibility (PS) -42644 + (NN) -18948 + (LL) 23424
1D Compatibility (HY) -2800 + (ID) 3750
Total energy: -154127.0 ( -43.08 by residue)
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_1TF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TF4-query.scw
PDB file : Tito_Scwrl_1TF4.pdb: