Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYKIVALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQKTEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTSGETVKKTKEKLFTGEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAGGIYVAARNVFE |
| 1RP3 Chain:B ((2-88)) | -----------------------------------------------VNRIELSRLIGLLLETSG----TNKIEDKVTLSKIAQELSKNDV------EEKDLEKKVKELKEKIEKGEYEVSDEKVVKGLIEFFT------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31499 for 353 contacts (89.2/contact) +
2D Compatibility (PS) -8574 + (NN) -3762 + (LL) 7356
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: 23119.0 ( 65.49 by residue)
QMean score : 0.521
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