Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDR---EDILLVKSGAIFEEV--NGKKKGIARCFFSKSLIFP-----T-R--DPIVLKAF-ETSEICFINAERAFGKLEEDQIL-SNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSN-SKTPIFPI-WLQINVLAKLANCSI-STISSTVNELHAEGILDIKSSPWKLKGKEKKIEILENENQKMKLNERKHKSNVF |
2BGC Chain:A ((18-220)) | -------------------------IKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74673 for 1253 contacts (-59.6/contact) +
2D Compatibility (PS) -19465 + (NN) 258 + (LL) 2980
1D Compatibility (HY) -8800 + (ID) 1100
Total energy: -100800.0 ( -80.45 by residue)
QMean score : 0.419
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