Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQDSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQ------IRYLDKLVDELAKGKKMEKILRK
4Q37 Chain:A ((1-120))
MYILFREMKNNWYSLAALLSTIYSRHLDVEARPVKFEEIKKFPPEKTIVAYSFMSFDLDTVREEVKTLKERG-----YTLIAGGPHVTADPEGCLRMGFDHVFTGDGEENILKFLMGERKKIFDG-
General information:
TITO was launched using:
RESULT:
Template:
4Q37.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22793 for 699 contacts (-32.6/contact) +
2D Compatibility (PS) -10832 + (NN) 4625 + (LL) 136
1D Compatibility (HY) 0 + (ID) 400
Total energy: -29264.0 ( -41.87 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_4Q37.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q37-query.scw
PDB file :
Tito_Scwrl_4Q37.pdb
: