Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRKLLKEKQIQLIFQLEQEENRFIRKRLIEELEFFEALGDREKGLLTAEQKLLILTPSEYREYKRTKSDVQISRIIGVSRSSLAEWKRKKGLNRKKSQPVQQEMIDVLAFHLDKTKEEIGALPASAIECQYEAFVINEANN
2XXS Chain:A ((1-107))
NSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETLEFGNDNF-----------PENIIPVTDSKSDGIIYLTIS--KDNICQFSDEKGEQIDINSQFNSFEYDGISFHLKNMRE----------------------DK
General information:
TITO was launched using:
RESULT:
Template:
2XXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 27991 for 737 contacts (38.0/contact) +
2D Compatibility (PS) -10600 + (NN) 5014 + (LL) 3704
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 21559.0 ( 29.25 by residue)
QMean score : 0.060
(partial model without unconserved sides chains):
PDB file :
Tito_2XXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XXS-query.scw
PDB file :
Tito_Scwrl_2XXS.pdb
: