Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKV-NIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFSATSDGFSVALGN----------LTDSVQISYTTTTTD-GGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAK-TKATL---EGAEFKLVDSK-GTVLQENITTNASGQLSIADLKFD-TYQLIETKAPTGYKLDTTPVE----FTIGENNQAITV---TKENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTL----QTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKATL------AGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
| 2X9X Chain:A ((32-418)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVGDVVEYEIVTKIPALANYATANWSDRMTEGLAFNKGTVKVTVDDVALEA--------GDYALTEVATGFDLKLTDAGLAKVNDQNAEKTVKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNT-------PKPNKPNENGDLTLTKTWVDATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVER-SIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVN-DKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKD-----------A----LDRAVAAYNAL-------------TAQ------KEKVDKA-QAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTATSYS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 54594 for 2517 contacts (21.7/contact) +
2D Compatibility (PS) -36653 + (NN) -3780 + (LL) 23524
1D Compatibility (HY) -13600 + (ID) 3800
Total energy: 20285.0 ( 8.06 by residue)
QMean score : 0.215
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